Research workbench
Solution structure of DNA polymerase X from the african swine fever virus
Analyse Solution structure of DNA polymerase X from the african swine fever virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1JAJ
- Type
- protein
- Length
- 174 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase beta-like protein
- UniProt
- P42494
- Pockets
- 3 · best druggability 0.73
Structure
solution nmr · 1 distinct chain · 32% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase beta-like protein | protein | 174 | 32% helix, 36% strand | P42494 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.73 | 0.98 | 19 | empty |
| 2 | 92 | 0.47 | 0.81 | 18 | empty |
| 3 | 112 | 0.42 | 0.76 | 18 | empty |
Compared structures
- 1JAJ · Solution Structure of DNA Polymerase X from the African Swine Fever Virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42494
- Elsewhere: RCSB PDB 1JAJ · PDBe 1JAJ · UniProt P42494
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