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Fera - NADH:FMN oxidoreductase from paracoccus denitrificans in complex with FMN

Analyse Fera - NADH:FMN oxidoreductase from paracoccus denitrificans in complex with FMN in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4XJ2
Type: protein
Length: 162 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flavin reductase domain protein, FMN-binding protein
UniProt: A1B5I2
Ligands: FMN
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Flavin reductase domain protein, FMN-binding protein	protein	162	12% helix, 43% strand	A1B5I2

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	126	0.39	0.74	21	FMN

Compared structures

4XJ2 · FerA - NADH:FMN oxidoreductase from Paracoccus denitrificans in complex with FMN · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A1B5I2
Elsewhere: RCSB PDB 4XJ2 · PDBe 4XJ2 · UniProt A1B5I2

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