Research workbench
Crystal structure of drosophila spinophilin-PDZ and a C-terminal peptide of neurexin
Analyse Crystal structure of drosophila spinophilin-PDZ and a C-terminal peptide of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4XHV
- Type
- protein
- Length
- 104 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LP20995P; Neurexin 1
- UniProt
- D1Z359, Q3KN41
- Ligands
- ZN, CL
Structure
x-ray diffraction · 2 distinct chains · 16% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | LP20995P | protein | 94 | 15% helix, 43% strand | D1Z359 |
| B | Neurexin 1 | protein | 10 | 30% helix, 20% strand | Q3KN41 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains B
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 526 Ų buried · 12 hydrogen bonds · protein-protein
Compared structures
- 4XHV · Crystal structure of Drosophila Spinophilin-PDZ and a C-terminal peptide of Neurexin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D1Z359
- Every structure of UniProt Q3KN41
- Elsewhere: RCSB PDB 4XHV · PDBe 4XHV · UniProt D1Z359 · UniProt Q3KN41
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