Research workbench
X-ray crystal structure of citrate synthase from burkholderia thailandensis
Analyse X-ray crystal structure of citrate synthase from burkholderia thailandensis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4XGH
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Citrate synthase
- UniProt
- Q2T7I5
- Ligands
- SO4
- Pockets
- 4 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Citrate synthase | protein | 390 | 53% helix, 6% strand | Q2T7I5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 969 | 0.72 | 0.76 | 60 | empty |
| 2 | 148 | 0.45 | 0.76 | 30 | empty |
| 3 | 74 | 0.44 | 0.81 | 22 | SO4, EDO |
| 4 | 52 | 0.29 | 0.75 | 20 | empty |
Compared structures
- 4XGH · X-ray Crystal Structure of Citrate Synthase from Burkholderia thailandensis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2T7I5
- Elsewhere: RCSB PDB 4XGH · PDBe 4XGH · UniProt Q2T7I5
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