Research workbench
Crystal structure of the periplasmic sensory domain of the campylobacter jejuni chemoreceptor TLP1
Analyse Crystal structure of the periplasmic sensory domain of the campylobacter jejuni… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4WY9
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative mcp-type signal transduction protein
- UniProt
- Q0P8B2
- Ligands
- CL
- Pockets
- 2 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative mcp-type signal transduction protein | protein | 285 | 40% helix, 28% strand | Q0P8B2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.37 | 0.79 | 13 | empty |
| 2 | 63 | 0.33 | 0.76 | 15 | empty |
Compared structures
- 4WY9 · Crystal structure of the periplasmic sensory domain of the Campylobacter jejuni… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0P8B2
- Elsewhere: RCSB PDB 4WY9 · PDBe 4WY9 · UniProt Q0P8B2
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