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Crystal structure of glucosamine-6-phosphate deaminase (TM0813) from thermotoga maritima at 1.8 a resolution
Analyse Crystal structure of glucosamine-6-phosphate deaminase (TM0813) from thermotoga… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1J5X
- Type
- protein
- Length
- 319 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glucosamine-6-phosphate deaminase
- EC
- 3.5.99.6
- UniProt
- Q9WZS0
- Pockets
- 1 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | protein | 319 | 51% helix, 16% strand | Q9WZS0 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 142 | 0.55 | 0.82 | 23 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 1J5X · Crystal structure of Glucosamine-6-phosphate deaminase (TM0813) from Thermotoga maritima… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WZS0
- Elsewhere: RCSB PDB 1J5X · PDBe 1J5X · UniProt Q9WZS0
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