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Rubisco activase from arabidopsis thaliana

Analyse Rubisco activase from arabidopsis thaliana in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4W5W
Type: protein
Length: 269 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribulose bisphosphate CARBOXYLASE/OXYGENASE activase, chloroplastic
UniProt: P10896
Ligands: SO4
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 50% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribulose bisphosphate CARBOXYLASE/OXYGENASE activase, chloroplastic	protein	269	50% helix, 9% strand	P10896

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	89	0.51	0.82	20	empty

Compared structures

4W5W · Rubisco activase from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
P10896 · AlphaFold monomer V2.0 prediction for ribulose bisphosphate CARBOXYLASE/OXYGENASE… · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10896
Elsewhere: RCSB PDB 4W5W · PDBe 4W5W · UniProt P10896

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