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Crystal structure of a mycobacterial ATP synthase rotor ring in complex with iodo-bedaquiline

Analyse Crystal structure of a mycobacterial ATP synthase rotor ring in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4V1H
Type
protein
Length
255 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
F0F1 ATP synthase subunit C
EC
3.6.3.14
UniProt
I0RTF3
Ligands
IBQ, TAM

Structure

x-ray diffraction · 1 distinct chain · 87% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, CF0F1 ATP synthase subunit C (EC 3.6.3.14)protein8587% helix, 0% strandI0RTF3

Ligands and binding sites

  • IBQ · Iodo-bedaquiline · ligand · 3 copies · chains A, B, C
  • TAM · Tris(hydroxyethyl)aminomethane · ligand · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

2 interfaces between chains.

  • B–C · 1792 Ų buried · 14 hydrogen bonds · protein-protein
  • A–B · 1729 Ų buried · 9 hydrogen bonds · protein-protein

Compared structures

  • 4V1H · Crystal structure of a mycobacterial ATP synthase rotor ring in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

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