Research workbench
The structure of the flagellar hook junction protein flgk from burkholderia pseudomallei
Analyse The structure of the flagellar hook junction protein flgk from burkholderia… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4UT1
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flagellar hook-associated protein
- UniProt
- Q63YA8
- Pockets
- 2 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flagellar hook-associated protein | protein | 551 | 39% helix, 25% strand | Q63YA8 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 20 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.56 | 0.76 | 40 | EDO |
| 2 | 63 | 0.30 | 0.75 | 15 | empty |
Compared structures
- 4UT1 · The structure of the flagellar hook junction protein FlgK from Burkholderia pseudomallei · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63YA8
- Elsewhere: RCSB PDB 4UT1 · PDBe 4UT1 · UniProt Q63YA8
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