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Cryo-EM MAP of trigger factor bound to a translating ribosome

Analyse Cryo-EM MAP of trigger factor bound to a translating ribosome in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4URD
Type: protein
Length: 115 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Trigger factor
UniProt: I4UK46
Pockets: 1 · best druggability 0.44

Structure

electron microscopy · 1 distinct chain · 36% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trigger factor	protein	115	36% helix, 19% strand	I4UK46

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	156	0.44	0.74	21	empty

Compared structures

4URD · Cryo-EM map of Trigger Factor bound to a translating ribosome · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt I4UK46
Elsewhere: RCSB PDB 4URD · PDBe 4URD · UniProt I4UK46

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