Research workbench
Structure of surface layer protein sbsc, domains 1-6
Analyse Structure of surface layer protein sbsc, domains 1-6 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4UJ6
- Type
- protein
- Length
- 711 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Surface layer protein
- UniProt
- O68840
- Pockets
- 5 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Surface layer protein | protein | 711 | 28% helix, 36% strand | O68840 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 301 | 0.52 | 0.74 | 34 | empty |
| 2 | 53 | 0.40 | 0.81 | 19 | empty |
| 3 | 100 | 0.34 | 0.73 | 19 | empty |
| 4 | 71 | 0.32 | 0.75 | 12 | empty |
| 5 | 54 | 0.26 | 0.73 | 10 | empty |
Compared structures
- 4UJ6 · Structure of surface layer protein SbsC, domains 1-6 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68840
- Elsewhere: RCSB PDB 4UJ6 · PDBe 4UJ6 · UniProt O68840
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