Research workbench
Crystal structure of the S-layer protein sbsc domains 4 and 5
Analyse Crystal structure of the S-layer protein sbsc domains 4 and 5 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4UID
- Type
- protein
- Length
- 375 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Surface layer protein
- UniProt
- O68840
- Pockets
- 2 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 2% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Surface layer protein | protein | 200 | 2% helix, 59% strand | O68840 |
| B | Surface layer protein | protein | 175 | 2% helix, 55% strand | O68840 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 365 | 0.58 | 0.76 | 53 | empty |
| 2 | 53 | 0.26 | 0.73 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 633 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 4UID · Crystal structure of the S-layer protein SbsC domains 4 and 5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68840
- Elsewhere: RCSB PDB 4UID · PDBe 4UID · UniProt O68840
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