Research workbench
Cryo-EM structure of tmv at 3.35 a resolution
Analyse Cryo-EM structure of tmv at 3.35 a resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4UDV
- Type
- protein + RNA
- Length
- 156 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Capsid protein; 5'-D(*GP*AP*AP)-3'
- UniProt
- P69687
Structure
electron microscopy · 2 distinct chains · 50% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Capsid protein | protein | 153 | 50% helix, 7% strand | P69687 |
| R | 5'-D(*GP*AP*AP)-3' | rna | 3 | — | — |
Interfaces
1 interface between chains.
- A–R · 392 Ų buried · 13 hydrogen bonds · protein-nucleic
Compared structures
- 4UDV · Cryo-EM structure of TMV at 3.35 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69687
- Elsewhere: RCSB PDB 4UDV · PDBe 4UDV · UniProt P69687
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