Research workbench
N-terminal domain of C. reinhardtii sas-6 homolog BLD12P Q93E (NN10)
Analyse N-terminal domain of C. reinhardtii sas-6 homolog BLD12P Q93E (NN10) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4TQ7
- Type
- protein
- Length
- 284 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Centriole protein
- UniProt
- A9CQL4
- Pockets
- 2 · best druggability 0.44
Structure
x-ray diffraction · 2 distinct chains · 17% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Centriole protein | protein | 140 | 17% helix, 49% strand | A9CQL4 |
| B | Centriole protein | protein | 144 | 17% helix, 50% strand | A9CQL4 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.44 | 0.78 | 25 | empty |
| 2 | 54 | 0.26 | 0.73 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 804 Ų buried · 12 hydrogen bonds · protein-protein
Compared structures
- 4TQ7 · N-terminal domain of C. Reinhardtii SAS-6 homolog bld12p Q93E (NN10) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9CQL4
- Elsewhere: RCSB PDB 4TQ7 · PDBe 4TQ7 · UniProt A9CQL4
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