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Crystal structure of phab from synechocystis sp. pcc 6803
Analyse Crystal structure of phab from synechocystis sp. pcc 6803 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4RZI
- Type
- protein
- Length
- 717 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 3-ketoacyl-acyl carrier protein reductase
- UniProt
- M1M987
- Pockets
- 4 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A, C | 3-ketoacyl-acyl carrier protein reductase | protein | 239 | 46% helix, 17% strand | M1M987 |
Pockets
4 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 804 | 0.72 | 0.77 | 73 | empty |
| 2 | 464 | 0.67 | 0.79 | 43 | empty |
| 3 | 418 | 0.67 | 0.79 | 33 | empty |
| 4 | 411 | 0.66 | 0.79 | 44 | empty |
Interfaces
2 interfaces between chains.
- B–A · 395 Ų buried · 1 hydrogen bond · protein-protein
- A–C · 150 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 4RZI · Crystal structure of PhaB from Synechocystis sp. PCC 6803 · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M1M987
- Elsewhere: RCSB PDB 4RZI · PDBe 4RZI · UniProt M1M987
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