Research workbench
Landomycin glycosyltransferase LANGT2
Analyse Landomycin glycosyltransferase LANGT2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4RIE
- Type
- protein
- Length
- 709 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycosyl transferase homolog
- UniProt
- Q9ZGC0
- Pockets
- 7 · best druggability 0.78
Structure
x-ray diffraction · 2 distinct chains · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycosyl transferase homolog | protein | 358 | 47% helix, 16% strand | Q9ZGC0 |
| B | Glycosyl transferase homolog | protein | 351 | 47% helix, 17% strand | Q9ZGC0 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 946 | 0.78 | 0.80 | 74 | empty |
| 2 | 504 | 0.69 | 0.79 | 70 | empty |
| 3 | 350 | 0.60 | 0.77 | 32 | empty |
| 4 | 137 | 0.57 | 0.83 | 27 | empty |
| 5 | 135 | 0.53 | 0.81 | 26 | empty |
Interfaces
1 interface between chains.
- A–B · 1553 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 4RIE · Landomycin Glycosyltransferase LanGT2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZGC0
- Elsewhere: RCSB PDB 4RIE · PDBe 4RIE · UniProt Q9ZGC0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.