Research workbench
Deor family transcriptional regulator from listeria monocytogenes.
Analyse Deor family transcriptional regulator from listeria monocytogenes. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4R9N
- Type
- protein
- Length
- 247 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LMO0547 protein
- UniProt
- Q8Y9I1
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | LMO0547 protein | protein | 247 | 47% helix, 18% strand | Q8Y9I1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 196 | 0.62 | 0.83 | 30 | empty |
| 2 | 52 | 0.38 | 0.80 | 15 | empty |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 4R9N · DeoR family transcriptional regulator from Listeria monocytogenes. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Y9I1
- Elsewhere: RCSB PDB 4R9N · PDBe 4R9N · UniProt Q8Y9I1
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