Research workbench
Crystal structure of a DUF3836 family protein (BVU_1206) from bacteroides vulgatus atcc 8482 at 2.50 a resolution
Analyse Crystal structure of a DUF3836 family protein (BVU_1206) from bacteroides… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4R8O
- Type
- protein
- Length
- 196 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- A6KZN2
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 70% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Uncharacterized protein | protein | 98 | 0% helix, 70% strand | A6KZN2 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.61 | 0.79 | 30 | empty |
| 2 | 172 | 0.50 | 0.78 | 31 | empty |
Interfaces
1 interface between chains.
- A–B · 827 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 12 modified (engineered).
Compared structures
- 4R8O · Crystal structure of a DUF3836 family protein (BVU_1206) from Bacteroides vulgatus ATCC… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6KZN2
- Elsewhere: RCSB PDB 4R8O · PDBe 4R8O · UniProt A6KZN2
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