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CRY3A toxin structure obtained by injecting bacillus thuringiensis cells in an xfel beam, collecting data by serial femtosecond crystallographic methods and processing data with the crystfel software suite

Analyse CRY3A toxin structure obtained by injecting bacillus thuringiensis cells in an… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4QX3
Type: protein
Length: 584 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pesticidal crystal protein CRY3AA
UniProt: P0A379
Pockets: 6 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pesticidal crystal protein CRY3AA	protein	584	33% helix, 30% strand	P0A379

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	298	0.69	0.83	31	empty
2	171	0.66	0.86	32	empty
3	127	0.48	0.79	19	empty
4	143	0.41	0.74	27	empty
5	110	0.35	0.73	24	empty

Compared structures

4QX3 · Cry3A Toxin structure obtained by injecting Bacillus thuringiensis cells in an XFEL beam… · the same entry in another collection · chain A against A, TM-score 1.00
P0A379 · AlphaFold monomer V2.0 prediction for pesticidal crystal protein CRY3AA (P0A379) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A379
Elsewhere: RCSB PDB 4QX3 · PDBe 4QX3 · UniProt P0A379

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