Research workbench
Crystal structure of tudor domain of SMN1 in complex with a small organic molecule
Analyse Crystal structure of tudor domain of SMN1 in complex with a small organic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4QQ6
- Type
- protein
- Length
- 58 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Survival motor neuron protein
- UniProt
- Q16637
- Ligands
- 36X, UNX
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Survival motor neuron protein | protein | 58 | 5% helix, 47% strand | Q16637 |
Ligands and binding sites
- 36X · 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine · ligand · chains A
- UNX · Unknown atom or ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4QQ6 · Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule · the same entry in another collection · chain A against A, TM-score 1.00
- Q16637 · AlphaFold monomer V2.0 prediction for survival motor neuron protein (Q16637) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q16637
- Elsewhere: RCSB PDB 4QQ6 · PDBe 4QQ6 · UniProt Q16637
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