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Crystal structure of ribosome recycling factor from vibrio parahaemolyticus

Analyse Crystal structure of ribosome recycling factor from vibrio parahaemolyticus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IS1
Type: protein
Length: 185 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribosome recycling factor
UniProt: Q8GRF5
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 61% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosome recycling factor	protein	185	61% helix, 16% strand	Q8GRF5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.30	0.75	15	empty

Compared structures

1IS1 · Crystal structure of ribosome recycling factor from Vibrio parahaemolyticus · the same entry in another collection · chain A against A, TM-score 1.00
Q8GRF5 · AlphaFold monomer V2.0 prediction for ribosome-recycling factor (Q8GRF5) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8GRF5
Elsewhere: RCSB PDB 1IS1 · PDBe 1IS1 · UniProt Q8GRF5

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