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Crystal structure of antigen 85C-E228Q mutant

Analyse Crystal structure of antigen 85C-E228Q mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4QDZ
Type: protein
Length: 268 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Diacylglycerol ACYLTRANSFERASE/MYCOLYLTRANSFERASE AG85C
EC: 2.3.1.122, 2.3.1.20
UniProt: P9WQN9
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Diacylglycerol ACYLTRANSFERASE/MYCOLYLTRANSFERASE AG85C (EC 2.3.1.122, 2.3.1.20)	protein	268	40% helix, 17% strand	P9WQN9

Ligands and binding sites

P6G · Hexaethylene glycol · additive · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	225	0.51	0.76	37	empty

Compared structures

4QDZ · Crystal structure of Antigen 85C-E228Q mutant · the same entry in another collection · chain A against A, TM-score 1.00
P9WQN9 · AlphaFold monomer V2.0 prediction for diacylglycerol ACYLTRANSFERASE/MYCOLYLTRANSFERASE… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P9WQN9
Elsewhere: RCSB PDB 4QDZ · PDBe 4QDZ · UniProt P9WQN9

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