Research workbench
Crystal structure of rot, a global regulator of virulence genes in staphylococcus aureus
Analyse Crystal structure of rot, a global regulator of virulence genes in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4Q77
- Type
- protein
- Length
- 250 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hth-type transcriptional regulator rot
- UniProt
- Q6GFT9
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Hth-type transcriptional regulator rot | protein | 125 | 74% helix, 8% strand | Q6GFT9 |
Ligands and binding sites
- GOL · Glycerol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1549 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 4Q77 · Crystal structure of Rot, a global regulator of virulence genes in Staphylococcus aureus · the same entry in another collection · chain A against A, TM-score 1.00
- Q6GFT9 · AlphaFold monomer V2.0 prediction for hth-type transcriptional regulator rot (Q6GFT9) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GFT9
- Elsewhere: RCSB PDB 4Q77 · PDBe 4Q77 · UniProt Q6GFT9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.