Research workbench
Crystal structure of extended-tudor 10-11 of drosophila melanogaster
Analyse Crystal structure of extended-tudor 10-11 of drosophila melanogaster in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4Q5Y
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maternal protein tudor
- UniProt
- P25823
- Pockets
- 3 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 23% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maternal protein tudor | protein | 353 | 23% helix, 35% strand | P25823 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 242 | 0.56 | 0.78 | 37 | empty |
| 2 | 160 | 0.45 | 0.76 | 37 | empty |
| 3 | 88 | 0.34 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4Q5Y · Crystal structure of extended-Tudor 10-11 of Drosophila melanogaster · the same entry in another collection · chain A against A, TM-score 1.00
- P25823 · AlphaFold monomer V2.0 prediction for maternal protein tudor (P25823) · a predicted model of the same protein · chain A against A, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25823
- Elsewhere: RCSB PDB 4Q5Y · PDBe 4Q5Y · UniProt P25823
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