Research workbench

Crystal structure at 1.8 a of toxin a from naja nigricollis venom

Analyse Crystal structure at 1.8 a of toxin a from naja nigricollis venom in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IQ9
Type: protein
Length: 61 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Alpha-neurotoxin
UniProt: P01426
Ligands: SO4

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Alpha-neurotoxin	protein	61	0% helix, 44% strand	P01426

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1IQ9 · crystal structure at 1.8 A of toxin a from Naja nigricollis venom · the same entry in another collection · chain A against A, TM-score 1.00
P01426 · AlphaFold monomer V2.0 prediction for short neurotoxin 1 (P01426) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01426
Elsewhere: RCSB PDB 1IQ9 · PDBe 1IQ9 · UniProt P01426

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.