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Oxidized BOLA2 from arabidopsis thaliana

Analyse Oxidized BOLA2 from arabidopsis thaliana in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4PUH
Type: protein
Length: 162 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: AT5G09830
UniProt: Q9FIC3
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	AT5G09830	protein	81	41% helix, 26% strand	Q9FIC3

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	53	0.48	0.86	14	empty

Interfaces

1 interface between chains.

A–B · 187 Å² buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

4PUH · Oxidized BolA2 from Arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
Q9FIC3 · AlphaFold monomer V2.0 prediction for protein BOLA2 (Q9FIC3) · a predicted model of the same protein · chain B against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9FIC3
Elsewhere: RCSB PDB 4PUH · PDBe 4PUH · UniProt Q9FIC3

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