Research workbench
Crystal structure of phytohormone binding protein from vigna radiata in complex with gibberellic acid (GA3)
Analyse Crystal structure of phytohormone binding protein from vigna radiata in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4PSB
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cytokinin-specific binding protein
- UniProt
- Q9ZWP8
- Ligands
- GA3
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cytokinin-specific binding protein | protein | 152 | 28% helix, 45% strand | Q9ZWP8 |
Ligands and binding sites
- GA3 · Gibberellin A3 · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 328 | 0.77 | 0.87 | 29 | GA3 |
Compared structures
- 4PSB · Crystal Structure of Phytohormone Binding Protein from Vigna radiata in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZWP8
- Elsewhere: RCSB PDB 4PSB · PDBe 4PSB · UniProt Q9ZWP8
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