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Crystal structure of an inhibitor of vertebrate lysozyme (PA3902) from pseudomonas aeruginosa PAO1 at 1.25 a resolution

Analyse Crystal structure of an inhibitor of vertebrate lysozyme (PA3902) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4PS6
Type: protein
Length: 130 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Inhibitor of vertebrate lysozyme
UniProt: Q9HXB1
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Inhibitor of vertebrate lysozyme	protein	130	29% helix, 29% strand	Q9HXB1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	79	0.36	0.76	16	empty

Modifications

Observed in the structure: 3 modified, 1 disulfide (engineered, disulfide).

Compared structures

4PS6 · Crystal structure of an inhibitor of vertebrate lysozyme (PA3902) from Pseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00
Q9HXB1 · AlphaFold monomer V2.0 prediction for inhibitor of vertebrate lysozyme (Q9HXB1) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HXB1
Elsewhere: RCSB PDB 4PS6 · PDBe 4PS6 · UniProt Q9HXB1

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