Research workbench
The septum site-determining protein mind complexed with mg-ADP from pyrococcus horikoshii OT3
Analyse The septum site-determining protein mind complexed with mg-ADP from pyrococcus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ION
- Type
- protein
- Length
- 243 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable cell division inhibitor mind
- UniProt
- O58346
- Ligands
- ADP, MG
- Pockets
- 1 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable cell division inhibitor mind | protein | 243 | 40% helix, 18% strand | O58346 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 166 | 0.50 | 0.78 | 30 | MG, ADP |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 1ION · The septum site-determining protein mind complexed with mg-ADP from pyrococcus horikoshii… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58346
- Elsewhere: RCSB PDB 1ION · PDBe 1ION · UniProt O58346
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.