Research workbench
Crystal structure of yetj from bacillus subtilis at pH 8 by back soaking
Analyse Crystal structure of yetj from bacillus subtilis at pH 8 by back soaking in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4PGV
- Type
- protein
- Length
- 207 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein yetj
- UniProt
- O31539
- Pockets
- 2 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 81% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein yetj | protein | 207 | 81% helix, 0% strand | O31539 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.53 | 0.79 | 23 | empty |
| 2 | 147 | 0.52 | 0.79 | 25 | empty |
Compared structures
- 4PGV · Crystal structure of YetJ from Bacillus Subtilis at pH 8 by back soaking · the same entry in another collection · chain A against A, TM-score 1.00
- O31539 · AlphaFold monomer V2.0 prediction for uncharacterized protein yetj (O31539) · a predicted model of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O31539
- Elsewhere: RCSB PDB 4PGV · PDBe 4PGV · UniProt O31539
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