Research workbench
Crystal structure of histidine-containing phosphotransfer protein AHP2 from arabidopsis thaliana
Analyse Crystal structure of histidine-containing phosphotransfer protein AHP2 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4PAC
- Type
- protein
- Length
- 153 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histidine-containing phosphotransfer protein 2
- UniProt
- Q9ZNV8
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histidine-containing phosphotransfer protein 2 | protein | 153 | 76% helix, 1% strand | Q9ZNV8 |
Ligands and binding sites
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
- IMD · Imidazole · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.47 | 0.78 | 24 | empty |
Compared structures
- 4PAC · Crystal Structure of Histidine-containing Phosphotransfer Protein AHP2 from Arabidopsis… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9ZNV8 · AlphaFold monomer V2.0 prediction for histidine-containing phosphotransfer protein 2… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZNV8
- Elsewhere: RCSB PDB 4PAC · PDBe 4PAC · UniProt Q9ZNV8
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