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Crystal structure of a trap periplasmic solute binding protein from ochrobactrum anthropi (OANT_4429), target efi-510151, C-termius bound in ligand binding pocket

Analyse Crystal structure of a trap periplasmic solute binding protein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4P47
Type: protein
Length: 320 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Trap dicarboxylate transporter, dctp subunit
UniProt: A6X7C5
Pockets: 2 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trap dicarboxylate transporter, dctp subunit	protein	320	53% helix, 20% strand	A6X7C5

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	370	0.62	0.78	53	empty
2	94	0.57	0.86	19	empty

Compared structures

4P47 · CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM OCHROBACTRUM ANTHROPI… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A6X7C5
Elsewhere: RCSB PDB 4P47 · PDBe 4P47 · UniProt A6X7C5

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