Research workbench
Crystal structure of the mouse SNX19 px domain
Analyse Crystal structure of the mouse SNX19 px domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4P2I
- Type
- protein
- Length
- 231 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MKIAA0254 protein
- UniProt
- Q80U53
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 2 distinct chains · 42% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | MKIAA0254 protein | protein | 117 | 41% helix, 33% strand | Q80U53 |
| B | MKIAA0254 protein | protein | 114 | 43% helix, 36% strand | Q80U53 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.36 | 0.76 | 24 | empty |
| 2 | 52 | 0.25 | 0.73 | 8 | empty |
Interfaces
1 interface between chains.
- A–B · 459 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 4P2I · Crystal structure of the mouse SNX19 PX domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q80U53
- Elsewhere: RCSB PDB 4P2I · PDBe 4P2I · UniProt Q80U53
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