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GLNK2 from haloferax mediterranei complexed with ADP

Analyse GLNK2 from haloferax mediterranei complexed with ADP in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4OZJ
Type
protein
Length
104 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Nitrogen regulatory protein P-II
UniProt
B8ZYW1
Ligands
ADP

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 33% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ANitrogen regulatory protein P-IIprotein10432% helix, 33% strandB8ZYW1

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 4OZJ · GlnK2 from Haloferax mediterranei complexed with ADP · the same entry in another collection · chain A against A, TM-score 1.00
  • B8ZYW1 · AlphaFold monomer V2.0 prediction for nitrogen regulatory protein GLNK2 (B8ZYW1) · a predicted model of the same protein · chain A against A, TM-score 0.98

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