Research workbench
Crystal structure of oncogenic suppression activity protein - a plasmid fertility inhibition factor, gold (I) cyanide derivative
Analyse Crystal structure of oncogenic suppression activity protein - a plasmid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4OVB
- Type
- protein
- Length
- 188 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein osa
- UniProt
- P29772
- Ligands
- AUC, PO4
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein osa | protein | 188 | 41% helix, 23% strand | P29772 |
Ligands and binding sites
- AUC · Gold (I) cyanide ion · ligand · 9 copies · chains A
- PO4 · Phosphate ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.37 | 0.76 | 12 | empty |
Compared structures
- 4OVB · Crystal structure of Oncogenic Suppression Activity Protein - A Plasmid Fertility… · the same entry in another collection · chain A against A, TM-score 1.00
- P29772 · AlphaFold monomer V2.0 prediction for protein osa (P29772) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29772
- Elsewhere: RCSB PDB 4OVB · PDBe 4OVB · UniProt P29772
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