Research workbench
Liganded sterol carrier protein type 2 (scp-2) like domain of human multifunctional enzyme type 2 (mfe-2)
Analyse Liganded sterol carrier protein type 2 (scp-2) like domain of human… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1IKT
- Type
- protein
- Length
- 115 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Estradiol 17 beta-dehydrogenase 4
- EC
- 1.1.1.62
- UniProt
- P51659
- Ligands
- OXN, SO4
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Estradiol 17 beta-dehydrogenase 4 (EC 1.1.1.62) | protein | 115 | 44% helix, 27% strand | P51659 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 337 | 0.72 | 0.83 | 33 | SO4, OXN |
Compared structures
- 1IKT · Liganded sterol carrier protein type 2 (scp-2) like domain of human multifunctional… · the same entry in another collection · chain A against A, TM-score 1.00
- P51659 · AlphaFold monomer V2.0 prediction for peroxisomal multifunctional enzyme type 2 (P51659) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P51659
- Elsewhere: RCSB PDB 1IKT · PDBe 1IKT · UniProt P51659
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.