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3D structure of the E1BETA subunit of pyruvate dehydrogenase from the archeon pyrobaculum aerophilum

Analyse 3D structure of the E1BETA subunit of pyruvate dehydrogenase from the archeon… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IK6
Type: protein
Length: 284 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pyruvate dehydrogenase
UniProt: Q8ZUR7
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pyruvate dehydrogenase	protein	284	40% helix, 23% strand	Q8ZUR7

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	113	0.38	0.74	23	empty

Compared structures

1IK6 · 3D structure of the E1beta subunit of pyruvate dehydrogenase from the archeon Pyrobaculum… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8ZUR7
Elsewhere: RCSB PDB 1IK6 · PDBe 1IK6 · UniProt Q8ZUR7

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