GL1X · GenesisL1 explorer

Research workbench

Crystal structure of the cupredoxin domain of amob from nitrosocaldus yellowstonii

Analyse Crystal structure of the cupredoxin domain of amob from nitrosocaldus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
4O65
Type
protein
Length
153 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative archaeal ammonia monooxygenase subunit B
UniProt
B0LKZ4
Ligands
CU, SO4

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 46% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APutative archaeal ammonia monooxygenase subunit Bprotein15311% helix, 46% strandB0LKZ4

Ligands and binding sites

  • CU · Copper (II) ion · metal · chains A
  • SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 4O65 · Crystal structure of the cupredoxin domain of amoB from Nitrosocaldus yellowstonii · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.