Research workbench
Crystal structure of an inositol hexakisphosphate kinase apo-EHIP6KA
Analyse Crystal structure of an inositol hexakisphosphate kinase apo-EHIP6KA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4O4C
- Type
- protein
- Length
- 482 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Inositol hexakisphosphate kinase
- EC
- 2.7.4.21
- UniProt
- N9UNA8
- Pockets
- 3 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Inositol hexakisphosphate kinase (EC 2.7.4.21) | protein | 241 | 34% helix, 27% strand | N9UNA8 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 547 | 0.64 | 0.76 | 46 | empty |
| 2 | 371 | 0.59 | 0.76 | 52 | empty |
| 3 | 361 | 0.58 | 0.75 | 48 | empty |
Interfaces
1 interface between chains.
- A–B · 228 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 4O4C · Crystal Structure of an Inositol hexakisphosphate kinase apo-EhIP6KA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt N9UNA8
- Elsewhere: RCSB PDB 4O4C · PDBe 4O4C · UniProt N9UNA8
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