Research workbench
Structure of a malarial protein
Analyse Structure of a malarial protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4O2X
- Type
- protein
- Length
- 911 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maltose-binding periplasmic protein, ATP-dependent clp protease adaptor protein clps…
- UniProt
- P0AEX9, Q8IEB2
- Pockets
- 4 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maltose-binding periplasmic protein, ATP-dependent clp protease adaptor protein clps containing protein chimeric construct | protein | 457 | 43% helix, 19% strand | P0AEX9, Q8IEB2 |
| B | Maltose-binding periplasmic protein, ATP-dependent clp protease adaptor protein clps containing protein chimeric construct | protein | 454 | 45% helix, 20% strand | P0AEX9, Q8IEB2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 491 | 0.61 | 0.75 | 69 | empty |
| 2 | 509 | 0.60 | 0.74 | 67 | empty |
| 3 | 68 | 0.34 | 0.76 | 13 | empty |
| 4 | 67 | 0.33 | 0.75 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 272 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 4O2X · Structure of a malarial protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEX9
- Every structure of UniProt Q8IEB2
- Elsewhere: RCSB PDB 4O2X · PDBe 4O2X · UniProt P0AEX9 · UniProt Q8IEB2
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