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Solution NMR structure of complex of 1:2 cyanovirin-N:MAN-ALPHA1,2- man-alpha restrained regularized mean coordinates

Analyse Solution NMR structure of complex of 1:2 cyanovirin-N:MAN-ALPHA1,2- man-alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1IIY
Type
protein
Length
101 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cyanovirin-N
UniProt
P81180
Ligands
MAN

Structure

solution nmr · 1 distinct chain · 13% helix, 57% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACyanovirin-Nprotein10113% helix, 57% strandP81180

Ligands and binding sites

  • MAN · alpha-D-mannopyranose · sugar · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 1IIY · Solution NMR Structure of Complex of 1:2 Cyanovirin-N:Man-Alpha1,2-Man-Alpha Restrained… · the same entry in another collection · chain A against A, TM-score 1.00
  • P81180 · AlphaFold monomer V2.0 prediction for cyanovirin-N (P81180) · a predicted model of the same protein · chain A against A, TM-score 0.97

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