Research workbench
Crystal structure of the complex between SNU13P and the pep domain of RSA1
Analyse Crystal structure of the complex between SNU13P and the pep domain of RSA1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4NUT
- Type
- protein
- Length
- 149 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 13 kda ribonucleoprotein-associated protein; Ribosome assembly 1 protein
- UniProt
- P39990, Q08932
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 55% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 13 kda ribonucleoprotein-associated protein | protein | 122 | 50% helix, 16% strand | P39990 |
| B | Ribosome assembly 1 protein | protein | 27 | 78% helix, 0% strand | Q08932 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 923 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 4NUT · Crystal structure of the complex between Snu13p and the PEP domain of Rsa1 · the same entry in another collection · chain A against A, TM-score 1.00
- P39990 · AlphaFold monomer V2.0 prediction for 13 kda ribonucleoprotein- associated protein… · a predicted model of the same protein · chain A against A, TM-score 0.93
- Q08932 · AlphaFold monomer V2.0 prediction for ribosome assembly 1 protein (Q08932) · a predicted model of the same protein · chain B against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39990
- Every structure of UniProt Q08932
- Elsewhere: RCSB PDB 4NUT · PDBe 4NUT · UniProt P39990 · UniProt Q08932
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.