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DNA-binding domain of RAP1 in complex with telomeric DNA site

Analyse DNA-binding domain of RAP1 in complex with telomeric DNA site in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IGN
Type: protein + DNA
Length: 453 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P11938

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C	—	dna	19	—	—
D, F	—	dna	19	—	—
E	—	dna	18	—	—
A, B	—	protein	189	—	P11938

Compared structures

1IGN · DNA-binding domain of RAP1 in complex with telomeric DNA site · the same entry in another collection · chain E against E, TM-score 1.00
P11938 · AlphaFold monomer V2.0 prediction for DNA-binding protein RAP1 (P11938) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P11938
Elsewhere: RCSB PDB 1IGN · PDBe 1IGN · UniProt P11938

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