Research workbench
Crystal structure of mycobacterial ftsx extracellular domain, bromide derivative
Analyse Crystal structure of mycobacterial ftsx extracellular domain, bromide derivative in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4N8O
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cell division protein ftsx
- UniProt
- P9WG19
- Ligands
- K, BR
- Pockets
- 1 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Cell division protein ftsx | protein | 99 | 39% helix, 22% strand | P9WG19 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.51 | 0.87 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 519 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 4N8O · Crystal structure of Mycobacterial FtsX extracellular domain, bromide derivative · the same entry in another collection · chain A against A, TM-score 1.00
- P9WG19 · AlphaFold monomer V2.0 prediction for cell division protein ftsx (P9WG19) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WG19
- Elsewhere: RCSB PDB 4N8O · PDBe 4N8O · UniProt P9WG19
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