Research workbench
Pseudo-atomic model of bacteriophage HK97 procapsid (prohead II)
Analyse Pseudo-atomic model of bacteriophage HK97 procapsid (prohead II) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1IF0
- Type
- protein
- Length
- 1,792 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (major capsid protein GP5)
- UniProt
- P49861
Structure
electron microscopy · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G | Protein (major capsid protein GP5) | protein | 256 | 0% helix, 0% strand | P49861 |
Interfaces
10 interfaces between chains.
- E–F · 365 Ų buried · 0 hydrogen bonds · protein-protein
- A–F · 308 Ų buried · 0 hydrogen bonds · protein-protein
- B–C · 216 Ų buried · 0 hydrogen bonds · protein-protein
- C–D · 214 Ų buried · 0 hydrogen bonds · protein-protein
- A–C · 178 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1IF0 · Pseudo-atomic model of bacteriophage HK97 procapsid (prohead II) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49861
- Elsewhere: RCSB PDB 1IF0 · PDBe 1IF0 · UniProt P49861
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