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High resolution crystal structure of the nisin leader peptidase nisp from lactococcus lactis
Analyse High resolution crystal structure of the nisin leader peptidase nisp from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4MZD
- Type
- protein
- Length
- 356 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nisin leader peptide-processing serine protease nisp
- EC
- 3.4.21.-
- UniProt
- D9IXC0
- Pockets
- 2 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nisin leader peptide-processing serine protease nisp (EC 3.4.21.-) | protein | 356 | 34% helix, 22% strand | D9IXC0 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.48 | 0.82 | 19 | empty |
| 2 | 101 | 0.33 | 0.73 | 22 | empty |
Compared structures
- 4MZD · High resolution crystal structure of the nisin leader peptidase NisP from Lactococcus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D9IXC0
- Elsewhere: RCSB PDB 4MZD · PDBe 4MZD · UniProt D9IXC0
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