Research workbench
Crystal structure of uncharacterized slya-like transcription regulator from listeria monocytogenes
Analyse Crystal structure of uncharacterized slya-like transcription regulator from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4MNU
- Type
- protein
- Length
- 301 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Slya-like transcription regulator
- UniProt
- Q8Y8S9
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 66% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Slya-like transcription regulator | protein | 151 | 66% helix, 7% strand | Q8Y8S9 |
| B | Slya-like transcription regulator | protein | 150 | 66% helix, 7% strand | Q8Y8S9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 811 | 0.77 | 0.81 | 74 | GOL |
| 2 | 73 | 0.68 | 0.94 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 3426 Ų buried · 39 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 4MNU · Crystal Structure of Uncharacterized SlyA-like Transcription Regulator from Listeria… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Y8S9
- Elsewhere: RCSB PDB 4MNU · PDBe 4MNU · UniProt Q8Y8S9
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