Research workbench
1.65A resolution structure of toxt from vibrio cholerae (P21 form)
Analyse 1.65A resolution structure of toxt from vibrio cholerae (P21 form) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4MLO
- Type
- protein
- Length
- 267 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tcp pilus virulence regulatory protein
- UniProt
- Q7BGC0
- Ligands
- PAM, CL
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tcp pilus virulence regulatory protein | protein | 267 | 46% helix, 22% strand | Q7BGC0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 272 | 0.77 | 0.89 | 35 | PAM |
| 2 | 204 | 0.55 | 0.79 | 34 | empty |
| 3 | 60 | 0.30 | 0.75 | 13 | empty |
Compared structures
- 4MLO · 1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7BGC0
- Elsewhere: RCSB PDB 4MLO · PDBe 4MLO · UniProt Q7BGC0
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