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Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella termitidis ATCC 33386

Analyse Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4M1A
Type: protein
Length: 216 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.9
Source: Sebaldella termitidis
Molecule: Hypothetical protein
UniProt: D1AJN4
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · resolution 1.9 · 1 distinct chain · 35% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein	protein	108	35% helix, 29% strand	D1AJN4

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	106	0.39	0.75	19	empty

Interfaces

1 interface between chains.

A–B · 655 Å² buried · 11 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

4M1A · Crystal structure of a domain of unknown function (DUF1904) from sebaldella termitidis… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D1AJN4
Elsewhere: RCSB PDB 4M1A · PDBe 4M1A · UniProt D1AJN4

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