Research workbench
Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.
Analyse Structural analysis of the microcephaly protein CPAP G-box domain suggests a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4LD3
- Type
- protein
- Length
- 170 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.44
- Source
- Danio rerio
- Molecule
- Uncharacterized protein; SCL-interrupting locus protein homolog
- UniProt
- E7FCY1, Q8JGS1
Structure
x-ray diffraction · resolution 2.44 · 2 distinct chains · 0% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 154 | 0% helix, 47% strand | E7FCY1 |
| B | SCL-interrupting locus protein homolog | protein | 16 | 0% helix, 0% strand | Q8JGS1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 736 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 4LD3 · Structural analysis of the microcephaly protein cpap G-box domain suggests a role in… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8JGS1 · AlphaFold monomer V2.0 prediction for scl-interrupting locus protein homolog (Q8JGS1) · a predicted model of the same protein · chain B against A, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E7FCY1
- Every structure of UniProt Q8JGS1
- Elsewhere: RCSB PDB 4LD3 · PDBe 4LD3 · UniProt E7FCY1 · UniProt Q8JGS1
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